STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR74395.1Thioredoxin Disulfide Isomerase. (136 aa)    
Predicted Functional Partners:
EPR74391.1
Hypothetical protein.
 
     0.896
EPR74392.1
Hypothetical protein.
 
     0.896
EPR74394.1
Thiamin biosynthesis lipoprotein ApbE.
 
     0.871
EPR74393.1
Thiamin biosynthesis lipoprotein ApbE.
 
     0.814
EPR74344.1
Thioredoxin reductase.
   
 0.700
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
    
 
 0.652
EPR73888.1
Thioredoxin reductase.
   
 0.599
EPR73294.1
Thioredoxin reductase.
   
 0.599
EPR72654.1
Thioredoxin reductase.
   
 0.599
EPR70071.1
Hypothetical protein.
   
 0.599
Your Current Organism:
Winogradskyella psychrotolerans
NCBI taxonomy Id: 641526
Other names: W. psychrotolerans RS-3, Winogradskyella psychrotolerans RS-3, Winogradskyella sp. RS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.