STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR73709.1Peptidoglycan-binding LysM. (125 aa)    
Predicted Functional Partners:
EPR70386.1
Hypothetical protein.
   
  
 0.884
EPR72142.1
Alpha,alpha-trehalose-phosphate synthase; Trehalose-6-phosphate phosphatase.
   
  
 0.808
EPR72048.1
Molybdopterin binding motif, CinA N-terminal domain protein; C-terminal domain of CinA type S; Belongs to the CinA family.
    
  0.804
EPR72068.1
GMP synthase; Overlaps another CDS with the same product name.
    
  0.757
EPR72069.1
GMP synthase; Overlaps another CDS with the same product name.
    
  0.757
EPR73820.1
Manganese transporter protein.
   
  
 0.651
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
   
 
 0.507
EPR72732.1
Hemagglutinin.
    
 0.499
EPR73707.1
Uracil phosphoribosyltransferase; Pyrimidine operon regulatory protein PyrR.
    
  0.478
EPR69759.1
Hypothetical protein.
 
     0.459
Your Current Organism:
Winogradskyella psychrotolerans
NCBI taxonomy Id: 641526
Other names: W. psychrotolerans RS-3, Winogradskyella psychrotolerans RS-3, Winogradskyella sp. RS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.