STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR72532.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      0.925
EPR72535.1
Hypothetical protein.
 
     0.825
EPR74291.1
TPR domain protein.
  
     0.718
EPR72395.1
Protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily.
  
     0.714
EPR73490.1
Hypothetical protein.
  
     0.701
EPR74804.1
Cell division protein FtsQ.
  
    0.671
EPR71232.1
Hypothetical protein.
  
     0.667
EPR73275.1
Putative uroporphyrinogen-III synthase HemD.
  
     0.658
EPR72922.1
Hypothetical protein.
  
     0.654
EPR71988.1
Ribosome hibernation protein YhbH.
  
     0.634
Your Current Organism:
Winogradskyella psychrotolerans
NCBI taxonomy Id: 641526
Other names: W. psychrotolerans RS-3, Winogradskyella psychrotolerans RS-3, Winogradskyella sp. RS-3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.