STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR72356.1Thiamine pyrophosphate enzyme-like TPP binding protein. (247 aa)    
Predicted Functional Partners:
EPR72357.1
Glutamate synthase [NADPH] large chain.
 
     0.944
EPR72358.1
Hypothetical protein.
       0.768
EPR70314.1
Hypothetical protein.
  
     0.611
EPR72355.1
Pyruvate oxidase; Belongs to the TPP enzyme family.
 
     0.553
EPR73528.1
Hypothetical protein.
  
     0.517
EPR72348.1
Metal-dependent phosphohydrolase.
 
     0.513
EPR73018.1
Hypothetical protein.
  
     0.454
EPR72760.1
Hypothetical protein.
  
     0.429
EPR71897.1
Hypothetical protein.
  
     0.418
EPR74909.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Winogradskyella psychrotolerans
NCBI taxonomy Id: 641526
Other names: W. psychrotolerans RS-3, Winogradskyella psychrotolerans RS-3, Winogradskyella sp. RS-3
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