STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418105_02575Unannotated protein. (420 aa)    
Predicted Functional Partners:
GCA_001418105_02574
Unannotated protein.
 
 0.994
GCA_001418105_02576
Unannotated protein.
 
   0.952
GCA_001418105_02796
Unannotated protein.
 
 0.923
GCA_001418105_03024
Unannotated protein.
 
 0.835
GCA_001418105_01031
Unannotated protein.
  
  
 
0.830
GCA_001418105_03405
Unannotated protein.
 
 0.816
GCA_001418105_02988
Unannotated protein.
 
 0.811
GCA_001418105_02577
Unannotated protein.
 
    0.810
GCA_001418105_01760
Unannotated protein.
 
 0.809
GCA_001418105_02578
Unannotated protein.
 
     0.786
Your Current Organism:
Lacinutrix himadriensis
NCBI taxonomy Id: 641549
Other names: CIP 110310, KCTC 23612, L. himadriensis, Lacinutrix himadriensis Srinivas et al. 2013, Lacinutrix sp. E4-9a, strain E4-9a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.