STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418105_02640Unannotated protein. (427 aa)    
Predicted Functional Partners:
GCA_001418105_02641
Unannotated protein.
 
     0.952
GCA_001418105_02638
Unannotated protein.
 
     0.596
GCA_001418105_02639
Unannotated protein.
 
     0.592
GCA_001418105_01361
Unannotated protein.
  
     0.491
GCA_001418105_00739
Unannotated protein.
  
     0.486
GCA_001418105_03728
Unannotated protein.
  
     0.453
GCA_001418105_01218
Unannotated protein.
  
     0.449
GCA_001418105_01224
Unannotated protein.
  
     0.439
GCA_001418105_00746
Unannotated protein.
  
     0.436
GCA_001418105_01663
Unannotated protein.
  
     0.434
Your Current Organism:
Lacinutrix himadriensis
NCBI taxonomy Id: 641549
Other names: CIP 110310, KCTC 23612, L. himadriensis, Lacinutrix himadriensis Srinivas et al. 2013, Lacinutrix sp. E4-9a, strain E4-9a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.