STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418105_03345Unannotated protein. (637 aa)    
Predicted Functional Partners:
GCA_001418105_03331
Unannotated protein.
  
 0.999
GCA_001418105_03462
Unannotated protein.
  
 0.999
GCA_001418105_03553
Unannotated protein.
  
 0.999
GCA_001418105_01333
Unannotated protein.
   
 0.987
GCA_001418105_03732
Unannotated protein.
   
 0.987
GCA_001418105_02470
Unannotated protein.
   
 0.984
GCA_001418105_01950
Unannotated protein.
  
 0.956
GCA_001418105_02073
Unannotated protein.
  
 0.941
GCA_001418105_01157
Unannotated protein.
  
 0.937
GCA_001418105_02572
Unannotated protein.
  
 0.937
Your Current Organism:
Lacinutrix himadriensis
NCBI taxonomy Id: 641549
Other names: CIP 110310, KCTC 23612, L. himadriensis, Lacinutrix himadriensis Srinivas et al. 2013, Lacinutrix sp. E4-9a, strain E4-9a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.