Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_002104455_00088 | GCA_002104455_00090 | GCA_002104455_00088 | GCA_002104455_00090 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_002104455_00088 | GCA_002104455_00091 | GCA_002104455_00088 | GCA_002104455_00091 | Unannotated protein. | Unannotated protein. | 0.952 |
GCA_002104455_00088 | GCA_002104455_01677 | GCA_002104455_00088 | GCA_002104455_01677 | Unannotated protein. | Unannotated protein. | 0.972 |
GCA_002104455_00088 | GCA_002104455_02315 | GCA_002104455_00088 | GCA_002104455_02315 | Unannotated protein. | Unannotated protein. | 0.970 |
GCA_002104455_00088 | bioB | GCA_002104455_00088 | GCA_002104455_03312 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.653 |
GCA_002104455_00088 | bioD | GCA_002104455_00088 | GCA_002104455_03309 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.464 |
GCA_002104455_00088 | purC | GCA_002104455_00088 | GCA_002104455_00854 | Unannotated protein. | Unannotated protein; Belongs to the SAICAR synthetase family. | 0.475 |
GCA_002104455_00088 | purM | GCA_002104455_00088 | GCA_002104455_03133 | Unannotated protein. | Unannotated protein. | 0.767 |
GCA_002104455_00088 | thiC | GCA_002104455_00088 | GCA_002104455_00092 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.999 |
GCA_002104455_00088 | thiG | GCA_002104455_00088 | GCA_002104455_00089 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
GCA_002104455_00090 | GCA_002104455_00088 | GCA_002104455_00090 | GCA_002104455_00088 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_002104455_00090 | GCA_002104455_00091 | GCA_002104455_00090 | GCA_002104455_00091 | Unannotated protein. | Unannotated protein. | 0.783 |
GCA_002104455_00090 | GCA_002104455_01677 | GCA_002104455_00090 | GCA_002104455_01677 | Unannotated protein. | Unannotated protein. | 0.983 |
GCA_002104455_00090 | GCA_002104455_02315 | GCA_002104455_00090 | GCA_002104455_02315 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_002104455_00090 | thiC | GCA_002104455_00090 | GCA_002104455_00092 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.926 |
GCA_002104455_00090 | thiG | GCA_002104455_00090 | GCA_002104455_00089 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
GCA_002104455_00091 | GCA_002104455_00088 | GCA_002104455_00091 | GCA_002104455_00088 | Unannotated protein. | Unannotated protein. | 0.952 |
GCA_002104455_00091 | GCA_002104455_00090 | GCA_002104455_00091 | GCA_002104455_00090 | Unannotated protein. | Unannotated protein. | 0.783 |
GCA_002104455_00091 | GCA_002104455_01677 | GCA_002104455_00091 | GCA_002104455_01677 | Unannotated protein. | Unannotated protein. | 0.403 |
GCA_002104455_00091 | thiC | GCA_002104455_00091 | GCA_002104455_00092 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.842 |
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