Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_002104455_00068 | GCA_002104455_00669 | GCA_002104455_00068 | GCA_002104455_00669 | Unannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | Unannotated protein. | 0.415 |
GCA_002104455_00068 | GCA_002104455_00865 | GCA_002104455_00068 | GCA_002104455_00865 | Unannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | Unannotated protein. | 0.444 |
GCA_002104455_00668 | GCA_002104455_00669 | GCA_002104455_00668 | GCA_002104455_00669 | Unannotated protein. | Unannotated protein. | 0.434 |
GCA_002104455_00669 | GCA_002104455_00068 | GCA_002104455_00669 | GCA_002104455_00068 | Unannotated protein. | Unannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.415 |
GCA_002104455_00669 | GCA_002104455_00668 | GCA_002104455_00669 | GCA_002104455_00668 | Unannotated protein. | Unannotated protein. | 0.434 |
GCA_002104455_00669 | GCA_002104455_00670 | GCA_002104455_00669 | GCA_002104455_00670 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_002104455_00669 | GCA_002104455_00674 | GCA_002104455_00669 | GCA_002104455_00674 | Unannotated protein. | Unannotated protein. | 0.429 |
GCA_002104455_00669 | GCA_002104455_00850 | GCA_002104455_00669 | GCA_002104455_00850 | Unannotated protein. | Unannotated protein. | 0.480 |
GCA_002104455_00669 | GCA_002104455_00865 | GCA_002104455_00669 | GCA_002104455_00865 | Unannotated protein. | Unannotated protein. | 0.402 |
GCA_002104455_00669 | GCA_002104455_01828 | GCA_002104455_00669 | GCA_002104455_01828 | Unannotated protein. | Unannotated protein. | 0.483 |
GCA_002104455_00669 | GCA_002104455_02605 | GCA_002104455_00669 | GCA_002104455_02605 | Unannotated protein. | Unannotated protein. | 0.516 |
GCA_002104455_00669 | mnmC | GCA_002104455_00669 | GCA_002104455_00414 | Unannotated protein. | Unannotated protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.437 |
GCA_002104455_00670 | GCA_002104455_00669 | GCA_002104455_00670 | GCA_002104455_00669 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_002104455_00674 | GCA_002104455_00669 | GCA_002104455_00674 | GCA_002104455_00669 | Unannotated protein. | Unannotated protein. | 0.429 |
GCA_002104455_00850 | GCA_002104455_00669 | GCA_002104455_00850 | GCA_002104455_00669 | Unannotated protein. | Unannotated protein. | 0.480 |
GCA_002104455_00865 | GCA_002104455_00068 | GCA_002104455_00865 | GCA_002104455_00068 | Unannotated protein. | Unannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.444 |
GCA_002104455_00865 | GCA_002104455_00669 | GCA_002104455_00865 | GCA_002104455_00669 | Unannotated protein. | Unannotated protein. | 0.402 |
GCA_002104455_00865 | GCA_002104455_02605 | GCA_002104455_00865 | GCA_002104455_02605 | Unannotated protein. | Unannotated protein. | 0.687 |
GCA_002104455_01828 | GCA_002104455_00669 | GCA_002104455_01828 | GCA_002104455_00669 | Unannotated protein. | Unannotated protein. | 0.483 |
GCA_002104455_01828 | GCA_002104455_02605 | GCA_002104455_01828 | GCA_002104455_02605 | Unannotated protein. | Unannotated protein. | 0.545 |
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