STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002104455_00929Unannotated protein. (289 aa)    
Predicted Functional Partners:
ureG
Unannotated protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
      0.702
nuoC
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
    0.639
GCA_002104455_00338
Unannotated protein.
   
    0.630
GCA_002104455_03559
Unannotated protein.
   
    0.617
nuoI
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
    0.583
GCA_002104455_01785
Unannotated protein.
   
    0.583
GCA_002104455_00931
Unannotated protein.
 
     0.558
GCA_002104455_00930
Unannotated protein.
       0.480
GCA_002104455_02613
Unannotated protein.
  
 
   0.419
GCA_002104455_02761
Unannotated protein.
  
     0.415
Your Current Organism:
Colwellia chukchiensis
NCBI taxonomy Id: 641665
Other names: C. chukchiensis, CGMCC 1.9127, Colwellia chukchiensis Yu et al. 2011, Colwellia sp. BCw111, DSM 22576, LMG 25329, LMG:25329, strain BCw111
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