STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD59435.1CarboxypepD_reg-like domain-containing protein. (129 aa)    
Predicted Functional Partners:
SDE48735.1
Protein TonB.
  
   0.783
SDE13706.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.705
SDD67284.1
Oxygen tolerance.
  
     0.559
SDE74115.1
Starch-binding associating with outer membrane.
  
 
   0.552
SDE92522.1
Outer membrane transport energization protein TonB.
  
   0.537
SDF07467.1
Hypothetical protein.
  
     0.536
SDD91923.1
Starch-binding associating with outer membrane.
  
 
   0.517
SDD67248.1
Tetratricopeptide repeat-containing protein.
  
     0.514
SDE67189.1
TonB-dependent Receptor Plug Domain.
  
     0.510
SDD59409.1
TonB-dependent receptor.
      
0.494
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.