STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD65280.1FKBP-type peptidyl-prolyl cis-trans isomerase. (158 aa)    
Predicted Functional Partners:
SDE13794.1
Protein involved in gliding motility SprA.
    
   0.907
SDE51034.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.858
SDE35845.1
EF hand.
   
 
 0.824
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.766
SDE05417.1
Protein of unknown function.
    
 
 0.740
SDE92035.1
Hypothetical protein.
    
 
 0.740
infA
Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.644
SDE04035.1
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family.
 
0.597
SDE90885.1
Aspartate kinase.
   
  0.591
SDE59837.1
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family.
 
0.561
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.