STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD56186.1Protein of unknown function, DUF547. (240 aa)    
Predicted Functional Partners:
SDD56223.1
Pyridine nucleotide-disulphide oxidoreductase.
 
     0.850
SDE64492.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
    
 0.838
SDD56253.1
4Fe-4S binding domain-containing protein.
 
    0.765
SDD71300.1
Hypothetical protein.
 
     0.715
SDD58102.1
Hypothetical protein.
 
     0.686
SDD56316.1
Glycosyl transferase family 2.
 
     0.659
SDE64021.1
Transferase 2, rSAM/selenodomain-associated.
  
     0.653
SDF19926.1
Hypothetical protein.
  
     0.652
SDD56412.1
Hypothetical protein.
 
     0.633
SDD58072.1
Rhodanese-related sulfurtransferase.
  
     0.624
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.