STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD69338.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
SDD84326.1
Hypothetical protein.
  
     0.750
SDE52312.1
Hypothetical protein.
  
     0.699
SDE62823.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.679
SDD84560.1
Hypothetical protein.
  
     0.635
SDD66248.1
Hypothetical protein.
  
     0.605
SDD73412.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.592
SDE90430.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.582
SDE59629.1
Hypothetical protein.
  
     0.578
SDE06299.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.574
SDD73369.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.557
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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