Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD56223.1 | SDD85687.1 | SAMN05421636_10141 | SAMN05421636_102125 | Pyridine nucleotide-disulphide oxidoreductase. | Endonuclease G. | 0.596 |
SDD85653.1 | SDD85687.1 | SAMN05421636_102124 | SAMN05421636_102125 | Peptide-methionine (R)-S-oxide reductase. | Endonuclease G. | 0.400 |
SDD85687.1 | SDD56223.1 | SAMN05421636_102125 | SAMN05421636_10141 | Endonuclease G. | Pyridine nucleotide-disulphide oxidoreductase. | 0.596 |
SDD85687.1 | SDD85653.1 | SAMN05421636_102125 | SAMN05421636_102124 | Endonuclease G. | Peptide-methionine (R)-S-oxide reductase. | 0.400 |
SDD85687.1 | polA | SAMN05421636_102125 | SAMN05421636_103380 | Endonuclease G. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.599 |
SDD85687.1 | rnz | SAMN05421636_102125 | SAMN05421636_107267 | Endonuclease G. | RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.995 |
polA | SDD85687.1 | SAMN05421636_103380 | SAMN05421636_102125 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Endonuclease G. | 0.599 |
rnz | SDD85687.1 | SAMN05421636_107267 | SAMN05421636_102125 | RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Endonuclease G. | 0.995 |