STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD92971.1Transcriptional regulator, AraC family. (290 aa)    
Predicted Functional Partners:
SDE60005.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
  0.766
SDE13848.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.764
SDE92675.1
Glutamate synthase (NADH) large subunit.
    
  0.762
SDD94248.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
 0.754
SDE90322.1
Prephenate dehydratase.
  
 
 0.730
SDD93008.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
  0.680
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
  0.673
SDE78946.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.622
SDD93077.1
Predicted dehydrogenase.
 
     0.619
SDE32464.1
Transcriptional regulator, GntR family.
  
  
 0.596
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.