Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD87772.1 | SDD94838.1 | SAMN05421636_102191 | SAMN05421636_102405 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Predicted D-glycerate permease. | 0.453 |
SDD94752.1 | SDD94782.1 | SAMN05421636_102402 | SAMN05421636_102403 | Gluconate 5-dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.861 |
SDD94752.1 | SDD94805.1 | SAMN05421636_102402 | SAMN05421636_102404 | Gluconate 5-dehydrogenase. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.445 |
SDD94752.1 | SDD94838.1 | SAMN05421636_102402 | SAMN05421636_102405 | Gluconate 5-dehydrogenase. | Predicted D-glycerate permease. | 0.440 |
SDD94752.1 | SDD94932.1 | SAMN05421636_102402 | SAMN05421636_102406 | Gluconate 5-dehydrogenase. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.598 |
SDD94782.1 | SDD94752.1 | SAMN05421636_102403 | SAMN05421636_102402 | Sugar phosphate isomerase/epimerase. | Gluconate 5-dehydrogenase. | 0.861 |
SDD94782.1 | SDD94805.1 | SAMN05421636_102403 | SAMN05421636_102404 | Sugar phosphate isomerase/epimerase. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.557 |
SDD94782.1 | SDD94838.1 | SAMN05421636_102403 | SAMN05421636_102405 | Sugar phosphate isomerase/epimerase. | Predicted D-glycerate permease. | 0.477 |
SDD94782.1 | SDD94932.1 | SAMN05421636_102403 | SAMN05421636_102406 | Sugar phosphate isomerase/epimerase. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.836 |
SDD94805.1 | SDD94752.1 | SAMN05421636_102404 | SAMN05421636_102402 | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | Gluconate 5-dehydrogenase. | 0.445 |
SDD94805.1 | SDD94782.1 | SAMN05421636_102404 | SAMN05421636_102403 | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | Sugar phosphate isomerase/epimerase. | 0.557 |
SDD94805.1 | SDD94838.1 | SAMN05421636_102404 | SAMN05421636_102405 | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | Predicted D-glycerate permease. | 0.785 |
SDD94805.1 | SDD94932.1 | SAMN05421636_102404 | SAMN05421636_102406 | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.509 |
SDD94805.1 | SDE24955.1 | SAMN05421636_102404 | SAMN05421636_104104 | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | Gluconokinase. | 0.513 |
SDD94838.1 | SDD87772.1 | SAMN05421636_102405 | SAMN05421636_102191 | Predicted D-glycerate permease. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.453 |
SDD94838.1 | SDD94752.1 | SAMN05421636_102405 | SAMN05421636_102402 | Predicted D-glycerate permease. | Gluconate 5-dehydrogenase. | 0.440 |
SDD94838.1 | SDD94782.1 | SAMN05421636_102405 | SAMN05421636_102403 | Predicted D-glycerate permease. | Sugar phosphate isomerase/epimerase. | 0.477 |
SDD94838.1 | SDD94805.1 | SAMN05421636_102405 | SAMN05421636_102404 | Predicted D-glycerate permease. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.785 |
SDD94838.1 | SDD94932.1 | SAMN05421636_102405 | SAMN05421636_102406 | Predicted D-glycerate permease. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.521 |
SDD94838.1 | SDE24955.1 | SAMN05421636_102405 | SAMN05421636_104104 | Predicted D-glycerate permease. | Gluconokinase. | 0.405 |
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