STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE06568.1Hypothetical protein. (383 aa)    
Predicted Functional Partners:
SDE06543.1
Histidinol-phosphate aminotransferase.
 
     0.894
SDE13848.1
Allosteric NADP-dependent malic enzyme.
  
  
 0.827
SDE32634.1
Purine-cytosine permease.
  
     0.627
SDE32464.1
Transcriptional regulator, GntR family.
  
     0.581
SDD57111.1
Glycerophosphoryl diester phosphodiesterase.
 
  
  0.570
SDE32566.1
Sugar (pentulose or hexulose) kinase.
 
    0.559
SDE06596.1
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
       0.526
SDE06489.1
Iron complex outermembrane recepter protein.
 
     0.517
SDD55978.1
Hypothetical protein.
  
     0.510
SDE49547.1
Four helix bundle sensory module for signal transduction.
  
     0.506
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.