STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE06770.1Haem-binding domain-containing protein. (157 aa)    
Predicted Functional Partners:
SDE66041.1
40-residue YVTN family beta-propeller repeat-containing protein.
  
 
 0.685
SDE92192.1
Hypothetical protein.
  
 
 0.685
SDF17461.1
Peptidylamidoglycolate lyase.
  
 
 0.685
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.655
SDE06843.1
Imelysin.
       0.646
SDE06793.1
Fe(3+) dicitrate transport protein.
       0.634
SDE06820.1
Vitamin K-dependent gamma-carboxylase.
       0.630
SDE06868.1
Protein of unknown function.
       0.514
SDD72510.1
WD40-like Beta Propeller Repeat.
  
   0.459
SDD94686.1
WD40-like Beta Propeller Repeat.
  
   0.433
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.