STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE07529.1Glutamine synthetase. (728 aa)    
Predicted Functional Partners:
SDE92675.1
Glutamate synthase (NADH) large subunit.
  
 
 0.961
SDE92703.1
Glutamate synthase (NADH) small subunit.
    
 0.950
SDE07554.1
Glutamine synthetase.
    
 0.949
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 
  0.893
SDD67069.1
Amidophosphoribosyltransferase.
    
  0.889
SDE65477.1
Carbamoyl-phosphate synthase large subunit.
    
 0.889
SDE76212.1
Carbamoyl-phosphate synthase large subunit.
    
 0.889
SDF19658.1
Glutamate synthase domain-containing protein 2.
  
 
 0.801
SDE61452.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
  
  0.794
SDE27214.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
  
  0.792
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.