STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE15192.1Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. (609 aa)    
Predicted Functional Partners:
SDE13637.1
Cytochrome c oxidase subunit 3.
 
 0.999
SDE13663.1
Cytochrome c oxidase subunit 3.
 
 0.999
SDE15170.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 0.999
SDD83012.1
Zinc protease; Belongs to the peptidase M16 family.
   
 
 0.995
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.995
SDF14454.1
Uncharacterized protein.
    
   0.990
SDE07440.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 
 0.977
SDE35321.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 
 0.977
SDE47316.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.958
SDE46873.1
Cbb3-type cytochrome oxidase component FixQ.
  
 0.942
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.