STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE25606.1Glutamine cyclotransferase. (384 aa)    
Predicted Functional Partners:
SDE25579.1
acyl-CoA thioester hydrolase.
       0.801
SDE25639.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.545
SDD94714.1
Xylitol oxidase.
    
   0.435
SDE31244.1
FAD/FMN-containing dehydrogenase.
    
   0.435
SDE24392.1
FAD/FMN-containing dehydrogenase.
    
   0.435
SDE46111.1
FAD/FMN-containing dehydrogenase.
    
   0.435
SDE85094.1
FAD binding domain-containing protein.
    
   0.435
SDF17498.1
FAD/FMN-containing dehydrogenase.
    
   0.435
SDE35845.1
EF hand.
    
   0.408
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.