STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE31763.1Protein of unknown function, DUF481. (256 aa)    
Predicted Functional Partners:
SDE31739.1
Hypothetical protein.
       0.773
SDD58005.1
ADP-ribosylglycohydrolase.
  
     0.662
SDD72305.1
Hypothetical protein.
  
     0.632
SDE72583.1
Hypothetical protein.
  
     0.586
SDE78640.1
SnoaL-like polyketide cyclase.
  
     0.579
SDE31673.1
Protein of unknown function.
 
     0.574
SDE31707.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
       0.551
SDE13098.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.539
SDF04534.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
     0.512
SDE64088.1
Phospholipase A1.
  
     0.510
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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