STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE31972.1DNA-binding transcriptional regulator, GntR family. (210 aa)    
Predicted Functional Partners:
SDE77365.1
Acetolactate synthase, small subunit.
   
    0.610
SDE13098.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.584
SDE31946.1
Hypothetical protein.
       0.503
SDE67956.1
Release factor glutamine methyltransferase.
   
   0.464
SDD69912.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
   
 0.401
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.