STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE45443.1Two component transcriptional regulator, winged helix family. (222 aa)    
Predicted Functional Partners:
SDE45424.1
Signal transduction histidine kinase.
  0.996
SDD59320.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 0.992
SDE34385.1
PAS domain S-box-containing protein.
 0.984
SDE44036.1
PAS domain S-box-containing protein.
 0.979
SDE50661.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.971
SDE24899.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  0.966
SDE48893.1
Hypothetical protein.
 
 0.963
SDF15809.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.950
SDF05515.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
0.941
SDE34603.1
PAS/PAC sensor signal transduction histidine kinase.
 0.909
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.