Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD72616.1 | SDE45511.1 | SAMN05421636_101520 | SAMN05421636_105135 | Membrane-bound lytic murein transglycosylase D. | Hypothetical protein; Belongs to the LOG family. | 0.550 |
SDD72616.1 | SDE50055.1 | SAMN05421636_101520 | SAMN05421636_105294 | Membrane-bound lytic murein transglycosylase D. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.430 |
SDD72616.1 | adk | SAMN05421636_101520 | SAMN05421636_103270 | Membrane-bound lytic murein transglycosylase D. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.890 |
SDE45487.1 | SDE45511.1 | SAMN05421636_105134 | SAMN05421636_105135 | Hypothetical protein. | Hypothetical protein; Belongs to the LOG family. | 0.773 |
SDE45487.1 | SDE45533.1 | SAMN05421636_105134 | SAMN05421636_105136 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.784 |
SDE45487.1 | SDE45556.1 | SAMN05421636_105134 | SAMN05421636_105137 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.562 |
SDE45511.1 | SDD72616.1 | SAMN05421636_105135 | SAMN05421636_101520 | Hypothetical protein; Belongs to the LOG family. | Membrane-bound lytic murein transglycosylase D. | 0.550 |
SDE45511.1 | SDE45487.1 | SAMN05421636_105135 | SAMN05421636_105134 | Hypothetical protein; Belongs to the LOG family. | Hypothetical protein. | 0.773 |
SDE45511.1 | SDE45533.1 | SAMN05421636_105135 | SAMN05421636_105136 | Hypothetical protein; Belongs to the LOG family. | ABC-2 type transport system permease protein. | 0.774 |
SDE45511.1 | SDE45556.1 | SAMN05421636_105135 | SAMN05421636_105137 | Hypothetical protein; Belongs to the LOG family. | ABC-2 type transport system permease protein. | 0.538 |
SDE45511.1 | SDE50055.1 | SAMN05421636_105135 | SAMN05421636_105294 | Hypothetical protein; Belongs to the LOG family. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.507 |
SDE45511.1 | adk | SAMN05421636_105135 | SAMN05421636_103270 | Hypothetical protein; Belongs to the LOG family. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.409 |
SDE45533.1 | SDE45487.1 | SAMN05421636_105136 | SAMN05421636_105134 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.784 |
SDE45533.1 | SDE45511.1 | SAMN05421636_105136 | SAMN05421636_105135 | ABC-2 type transport system permease protein. | Hypothetical protein; Belongs to the LOG family. | 0.774 |
SDE45533.1 | SDE45556.1 | SAMN05421636_105136 | SAMN05421636_105137 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.778 |
SDE45556.1 | SDE45487.1 | SAMN05421636_105137 | SAMN05421636_105134 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.562 |
SDE45556.1 | SDE45511.1 | SAMN05421636_105137 | SAMN05421636_105135 | ABC-2 type transport system permease protein. | Hypothetical protein; Belongs to the LOG family. | 0.538 |
SDE45556.1 | SDE45533.1 | SAMN05421636_105137 | SAMN05421636_105136 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.778 |
SDE50055.1 | SDD72616.1 | SAMN05421636_105294 | SAMN05421636_101520 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Membrane-bound lytic murein transglycosylase D. | 0.430 |
SDE50055.1 | SDE45511.1 | SAMN05421636_105294 | SAMN05421636_105135 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Hypothetical protein; Belongs to the LOG family. | 0.507 |
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