STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE45636.1Organic hydroperoxide reductase OsmC/OhrA. (152 aa)    
Predicted Functional Partners:
SDE45583.1
ABC-2 type transport system ATP-binding protein.
       0.773
SDE45608.1
ABC-type multidrug transport system, ATPase component.
       0.773
SDE45662.1
Hypothetical protein.
       0.773
SDE64492.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
    0.728
SDD94248.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.686
SDE45716.1
Outer membrane protein TolC.
 
     0.635
SDE45690.1
HlyD family secretion protein.
       0.615
SDE45740.1
Transcriptional regulator, TetR family.
       0.571
SDE45556.1
ABC-2 type transport system permease protein.
       0.492
SDE61097.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
  
 0.490
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.