STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE47482.1Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (241 aa)    
Predicted Functional Partners:
SDE47256.1
Transcriptional regulator, BadM/Rrf2 family.
 
  
 0.846
SDE47454.1
Cupin domain-containing protein.
       0.778
SDE47713.1
Hypothetical protein.
 
    0.745
SDE48088.1
Nitrous oxide reductase apoprotein.
 
    0.730
SDE47966.1
Nitrous oxidase accessory protein.
 
     0.696
SDE48057.1
Hypothetical protein.
 
     0.695
SDE48029.1
Copper chaperone NosL.
 
     0.684
SDE47898.1
Cu-processing system permease protein.
 
     0.683
SDE47624.1
Hypothetical protein.
 
     0.619
SDE48112.1
Cytochrome c, mono-and diheme variants.
  
    0.617
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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