STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE42705.1Arylsulfatase A. (477 aa)    
Predicted Functional Partners:
SDE42730.1
Hypothetical protein.
 
     0.783
SDE42782.1
Glycosyl hydrolases family 16.
 
     0.750
SDE61180.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.740
SDE42811.1
Arylsulfatase A.
  
 
0.678
SDE42759.1
MFS transporter, sugar porter (SP) family.
       0.597
SDE72379.1
Sulfatase.
  
     0.564
SDD86383.1
Protein involved in gliding motility GldK.
  
 
   0.535
SDE92096.1
Protein involved in gliding motility GldJ.
  
 
   0.484
SDE42849.1
Arylsulfatase A.
 
    
0.482
SDE42675.1
Hypothetical protein.
  
    0.473
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.