STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE43169.1Osmotically-inducible protein OsmY, contains BON domain. (223 aa)    
Predicted Functional Partners:
SDE85299.1
Uncharacterized membrane protein YtjA, UPF0391 family.
  
    0.646
SDE61097.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
    0.617
SDE64492.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
  
 0.483
SDD94248.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.476
SDE43194.1
Pyruvate, water dikinase.
       0.440
SDE43140.1
Osmotically-inducible protein OsmY, contains BON domain.
 
    
0.439
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.