STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE43482.1phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (266 aa)    
Predicted Functional Partners:
SDE43457.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.
 0.999
SDE43510.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.999
SDE91729.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.995
SDE75793.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.984
SDE06251.1
ABC-2 type transport system ATP-binding protein.
  
 
0.916
SDE04262.1
ABC-2 type transport system ATP-binding protein.
 
    
0.901
SDE36174.1
Putative ABC transport system permease protein.
 
      0.900
SDE91770.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
  
 
0.894
SDE13407.1
Putative ABC transport system permease protein.
 
      0.662
SDE13438.1
Putative ABC transport system permease protein.
 
      0.643
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.