STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE65552.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
SDE34248.1
Hypothetical protein.
  
     0.723
SDE44958.1
Hypothetical protein.
  
     0.720
SDE34276.1
Hypothetical protein.
  
     0.715
SDE65590.1
Signal transduction histidine kinase.
       0.714
SDE44401.1
Hypothetical protein.
  
     0.600
SDE23050.1
Protein of unknown function.
  
     0.591
SDE65503.1
fatty-acyl-CoA synthase.
       0.554
SDE26948.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
     
  0.499
SDF07632.1
Transketolase.
     
  0.499
SDF07664.1
Transketolase.
     
  0.499
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.