STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE75743.1Hypothetical protein. (947 aa)    
Predicted Functional Partners:
SDE62053.1
Membrane protein YfhO.
  
     0.762
SDE52338.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
   
 0.751
SDE88298.1
Surface antigen.
  
  
 0.704
SDD61502.1
Ig-like domain-containing protein.
  
     0.699
SDF07567.1
Lipopolysaccharide export system permease protein.
 
 
 0.693
SDE11236.1
Beta-barrel assembly machine subunit BamA.
  
  
 0.657
SDE22628.1
Hypothetical protein.
  
    0.647
SDD83504.1
Protein of unknown function.
  
     0.644
SDE63113.1
Lipopolysaccharide export system permease protein.
 
 
 0.633
SDE14347.1
Protein of unknown function.
  
     0.628
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.