STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE72716.1Right handed beta helix region. (606 aa)    
Predicted Functional Partners:
SDF04112.1
PKD domain-containing protein.
  
 0.891
SDE72816.1
Signal transduction histidine kinase.
 
   
 0.827
SDE72786.1
Arylsulfatase A.
 
     0.745
SDE72766.1
Sulfatase.
 
     0.713
SDE72737.1
Protein of unknown function.
 
     0.702
SDD87943.1
alpha-L-fucosidase 2.
  
  
  0.657
SDE42782.1
Glycosyl hydrolases family 16.
  
     0.651
SDD73910.1
Lysophospholipase L1.
  
 
  0.586
SDE72844.1
Arylsulfatase A.
 
     0.574
SDE41981.1
Carbohydrate family 9 binding domain-like.
  
     0.562
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.