STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE91551.1Selenocysteine lyase/Cysteine desulfurase. (362 aa)    
Predicted Functional Partners:
SDE96609.1
Cysteine desulfuration protein SufE.
  
 0.911
SDE61281.1
Thioredoxin reductase (NADPH).
  
 
  0.885
SDE88636.1
Thioredoxin reductase (NADPH).
  
 
  0.885
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.803
SDD94248.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
 0.785
SDE96678.1
Fe-S cluster assembly ATP-binding protein.
  
  
 0.784
SDE96653.1
Iron-regulated ABC transporter permease protein SufD.
  
 
 0.781
SDE96693.1
Iron-regulated ABC transporter membrane component SufB.
  
 
 0.781
SDD58669.1
Thioredoxin reductase (NADPH).
  
 
  0.760
SDE90576.1
Thioredoxin reductase (NADPH).
  
 
  0.760
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.