STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF02886.1Starch phosphorylase. (844 aa)    
Predicted Functional Partners:
SDE16285.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 0.838
SDE64492.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
 0.837
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.827
SDE16255.1
1,4-alpha-glucan branching enzyme.
  
 0.805
SDD61068.1
Starch synthase.
 
 
 0.801
SDE09287.1
Starch synthase.
 
 
 0.797
SDE66423.1
Alpha-amylase.
  
 0.772
SDF22539.1
Oligo-1,6-glucosidase.
  
 0.772
SDE65038.1
Phosphoglucomutase.
  
 
 0.770
SDE67863.1
Putative hydrolase of the HAD superfamily.
   
 
  0.737
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.