Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE25220.1 | SDE88600.1 | SAMN05421636_104113 | SAMN05421636_108183 | Broad specificity phosphatase PhoE. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.585 |
SDE25220.1 | SDF07632.1 | SAMN05421636_104113 | SAMN05421636_11113 | Broad specificity phosphatase PhoE. | Transketolase. | 0.906 |
SDE25220.1 | SDF07664.1 | SAMN05421636_104113 | SAMN05421636_11114 | Broad specificity phosphatase PhoE. | Transketolase. | 0.902 |
SDE25220.1 | pgi | SAMN05421636_104113 | SAMN05421636_104373 | Broad specificity phosphatase PhoE. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.905 |
SDE25220.1 | tal | SAMN05421636_104113 | SAMN05421636_104130 | Broad specificity phosphatase PhoE. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.906 |
SDE25220.1 | tal-2 | SAMN05421636_104113 | SAMN05421636_105177 | Broad specificity phosphatase PhoE. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.861 |
SDE25220.1 | tpiA | SAMN05421636_104113 | SAMN05421636_105354 | Broad specificity phosphatase PhoE. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.547 |
SDE75693.1 | SDE88600.1 | SAMN05421636_107139 | SAMN05421636_108183 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.579 |
SDE75693.1 | SDF07632.1 | SAMN05421636_107139 | SAMN05421636_11113 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase. | 0.890 |
SDE75693.1 | SDF07664.1 | SAMN05421636_107139 | SAMN05421636_11114 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase. | 0.893 |
SDE75693.1 | pgi | SAMN05421636_107139 | SAMN05421636_104373 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.968 |
SDE75693.1 | rpiA | SAMN05421636_107139 | SAMN05421636_104369 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.478 |
SDE75693.1 | tal | SAMN05421636_107139 | SAMN05421636_104130 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.919 |
SDE75693.1 | tal-2 | SAMN05421636_107139 | SAMN05421636_105177 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.957 |
SDE75693.1 | tpiA | SAMN05421636_107139 | SAMN05421636_105354 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.999 |
SDE88600.1 | SDE25220.1 | SAMN05421636_108183 | SAMN05421636_104113 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Broad specificity phosphatase PhoE. | 0.585 |
SDE88600.1 | SDE75693.1 | SAMN05421636_108183 | SAMN05421636_107139 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.579 |
SDE88600.1 | SDE91132.1 | SAMN05421636_108183 | SAMN05421636_108271 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.482 |
SDE88600.1 | SDF07632.1 | SAMN05421636_108183 | SAMN05421636_11113 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Transketolase. | 0.998 |
SDE88600.1 | SDF07664.1 | SAMN05421636_108183 | SAMN05421636_11114 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Transketolase. | 0.972 |
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