STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF12386.1Isoquinoline 1-oxidoreductase, alpha subunit. (156 aa)    
Predicted Functional Partners:
SDF12359.1
Hypothetical protein/isoquinoline 1-oxidoreductase, beta subunit.
 0.984
SDD86935.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.978
SDE68335.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.976
SDF22326.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.970
SDF22394.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
 0.938
SDE68363.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
 
 0.876
SDE68396.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.865
SDE15054.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
 0.781
SDE13848.1
Allosteric NADP-dependent malic enzyme.
   
 0.674
SDF12415.1
Hypothetical protein.
       0.538
Your Current Organism:
Pricia antarctica
NCBI taxonomy Id: 641691
Other names: DSM 23421, JCM 17291, Maribacter sp. ZS1-8, P. antarctica, Pricia antarctica Yu et al. 2012, strain ZS1-8
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