STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINH1Serpin peptidase inhibitor, clade H, member 1. (345 aa)    
Predicted Functional Partners:
FKBP10
Peptidyl-prolyl cis-trans isomerase FKBP10.
   
 
 0.708
PPIC
Peptidyl-prolyl isomerase C (cyclophilin C).
   
 0.696
PPIB
Peptidylprolyl isomerase B.
   
 0.678
COL8A1
Collagen alpha-1(VIII) chain isoform X1.
   
 0.668
PRDX4
Peroxiredoxin-4 isoform X1.
   
 
 0.665
HSPA8
Heat shock cognate 71 kDa protein.
   
  
 0.656
GIT2
GIT ArfGAP 2.
      
 0.655
NF2
Merlin isoform X1.
      
 0.655
ENSPMRP00000005450
annotation not available
   
 0.621
COL22A1
LOW QUALITY PROTEIN: collagen alpha-1(XXII) chain.
    
 0.611
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.