Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC8Tetratricopeptide repeat protein 8. (507 aa)    
Predicted Functional Partners:
BBS2
Bardet-Biedl syndrome 2 protein.
  
 
 0.999
BBS7
Bardet-Biedl syndrome 7 protein isoform X1.
  
 0.999
BBS9
Bardet-Biedl syndrome 9 protein.
    
 0.998
BBS1
Bardet-Biedl syndrome 1 protein isoform X1.
   
 0.997
LZTFL1
Leucine zipper transcription factor-like protein 1.
    
 0.992
ENSPMRP00000021641
annotation not available
  
 
 0.988
BBS5
Bardet-Biedl syndrome 5 protein isoform X1.
    
 0.988
KLHL41
Kelch repeat and BTB domain-containing protein 5/10.
    
 0.976
BBIP1
LOW QUALITY PROTEIN: BBSome-interacting protein 1.
    
 0.927
ENSPMRP00000004435
annotation not available
    
 0.927
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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