Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB3IL1Guanine nucleotide exchange factor for Rab-3A isoform X1. (424 aa)    
Predicted Functional Partners:
RAB3IP
Rab-3A-interacting protein.
    
   0.950
EXOC5
Exocyst complex component 5.
    
 0.893
EXOC4
Exocyst complex component 4 isoform X1.
    
 0.886
EXOC2
Exocyst complex component 2.
    
 0.882
EXOC6
Exocyst complex component 6 isoform X1.
    
 0.826
EXOC6B
Exocyst complex component 6B isoform X1.
    
 0.826
RAB11A
Ras-related protein Rab-11A.
    
 0.813
ENSPMRP00000027315
annotation not available
    
 0.813
ENSPMRP00000027322
annotation not available
    
 0.813
RAB11B
Ras-related protein Rab-11B.
    
 0.813
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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