STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS52LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog. (726 aa)    
Predicted Functional Partners:
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
    
 0.999
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform X1.
   
 0.995
VPS51
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog.
   
 0.993
VPS50
Syndetin isoform X1.
   
 0.988
EIPR1
EARP and GARP complex-interacting protein 1 isoform X1.
    
 0.963
COG8
Conserved oligomeric Golgi complex subunit 8.
   
 0.873
COG6
Conserved oligomeric Golgi complex subunit 6.
    
 0.869
COG3
Conserved oligomeric Golgi complex subunit 3 isoform X1.
    
 0.868
COG2
Conserved oligomeric Golgi complex subunit 2 isoform X1.
   
 
 0.842
DHH
Desert hedgehog protein.
    
 0.833
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.