STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSRP1Structure-specific recognition protein 1. (708 aa)    
Predicted Functional Partners:
RTF1
LOW QUALITY PROTEIN: RNA polymerase-associated protein RTF1 homolog.
   
 0.999
CTR9
RNA polymerase-associated protein CTR9 homolog.
   
 0.999
CDC73
Parafibromin.
   
 0.999
SUPT16H
FACT complex subunit SPT16.
   
 0.999
LEO1
RNA polymerase-associated protein LEO1.
   
 0.999
PAF1
RNA polymerase II-associated factor 1 homolog.
   
 0.998
SUPT6H
Transcription elongation factor SPT6.
   
 0.994
SUPT5H
Transcription elongation factor SPT5 isoform X1.
   
 0.993
MCM4
DNA replication licensing factor MCM4.
   
 0.985
MCM2
DNA replication licensing factor MCM2.
   
  0.982
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.