STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMRP00000002473Zinc finger protein 239-like. (400 aa)    
Predicted Functional Partners:
SH3RF3
SH3 domain containing ring finger 3.
    
 0.538
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
  0.448
HDAC2
Histone deacetylase 1/2.
    
 0.447
HDAC3
Histone deacetylase 3.
    
 0.447
HDAC1
Histone deacetylase 1/2.
    
 0.447
HDAC8
Histone deacetylase 8 isoform X1.
    
 0.447
RNASEL
2-5A-dependent ribonuclease.
   
 0.421
RIPK4
Receptor-interacting serine/threonine-protein kinase 4 isoform X1.
   
  0.405
ENSPMRP00000033757
annotation not available
   
  0.405
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.