STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC1Syndecan 1. (328 aa)    
Predicted Functional Partners:
SDC3
Syndecan 3.
  
0.968
THBS1
Thrombospondin 1.
    
 0.968
SDC4
Syndecan 4.
  
  
0.944
THBS2
Thrombospondin 2/3/4/5.
    
 0.940
THBS4
Thrombospondin-4 isoform X1.
    
 0.911
ENSPMRP00000031123
LOW QUALITY PROTEIN: cartilage oligomeric matrix protein-like.
    
 0.911
THBS3
LOW QUALITY PROTEIN: thrombospondin-3.
    
 0.909
FN1
LOW QUALITY PROTEIN: fibronectin.
     
 0.904
TNR
Tenascin-R.
     
 0.902
FGF2
Fibroblast growth factor 2.
    
 0.845
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.