STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX5Probable ATP-dependent RNA helicase DDX5 isoform X1. (592 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.934
DHX9
ATP-dependent RNA helicase A isoform X1.
   
 0.917
RBM39
RNA-binding protein 39 isoform X1.
   
 0.912
PES1
Pescadillo homolog.
   
 0.907
DDX17
Probable ATP-dependent RNA helicase DDX17.
  
 
0.895
DDX18
ATP-dependent RNA helicase DDX18 isoform X1.
  
0.890
FTSJ3
Pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3.
   
 0.885
GNL2
Nucleolar GTP-binding protein 2.
  
 0.875
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
 0.874
WDR12
Ribosome biogenesis protein WDR12.
   
 0.872
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.