STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIF3L1NIF3-like protein 1 isoform X1. (375 aa)    
Predicted Functional Partners:
COPS2
COP9 signalosome complex subunit 2 isoform X1.
   
 
 0.709
RNASEH1
Ribonuclease H1 isoform X1.
  
  
 0.698
GPN1
GPN-loop GTPase 1 isoform X1.
   
    0.692
PSMD12
26S proteasome non-ATPase regulatory subunit 12.
      
 0.657
PSMB3
Proteasome subunit beta type-3.
   
  
 0.653
COPS3
COP9 signalosome complex subunit 3.
      
 0.651
PSMD4
26S proteasome non-ATPase regulatory subunit 4.
      
 0.641
TGDS
DTDP-D-glucose 4,6-dehydratase isoform X1.
  
    0.633
PPIL3
Peptidyl-prolyl cis-trans isomerase-like 3.
   
  
 0.595
PSMA6
Proteasome subunit alpha type-6.
      
 0.584
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.