Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASIC1-2Acid-sensing ion channel 1 isoform X1. (528 aa)    
Predicted Functional Partners:
ASIC4
Acid sensing ion channel subunit family member 4.
     
 0.662
ENSPMRP00000036946
Erythrocyte band 7 integral membrane protein-like isoform X1.
    
 0.548
LOC114589467
Erythrocyte band 7 integral membrane protein-like isoform X1.
    
 0.548
LOC114589110
Erythrocyte band 7 integral membrane protein-like.
    
 0.548
STOML1
Stomatin-like protein 1 isoform X1.
    
 0.531
PICK1
PRKCA-binding protein.
    
 
 0.422
PIGQ
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q.
      
 0.416
LLPH
Protein LLP homolog.
      
 0.401
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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