STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTF2Replication termination factor 2. (309 aa)    
Predicted Functional Partners:
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
      
 0.648
TULP2
TUB like protein 2.
   
  
 0.593
CCDC130
Coiled-coil domain-containing protein 130.
      
 0.587
RTF1
LOW QUALITY PROTEIN: RNA polymerase-associated protein RTF1 homolog.
   
  
 0.581
SMU1
WD40 repeat-containing protein SMU1 isoform X1.
      
 0.572
SPACA9
Sperm acrosome-associated protein 9 isoform X1.
      
 0.569
SPATA16
Spermatogenesis-associated protein 16.
      
 0.548
TRMT1
TRNA (guanine(26)-N(2))-dimethyltransferase isoform X1.
    
   0.547
ENSPMRP00000005560
annotation not available
      
 0.543
ESS2
Splicing factor ESS-2 homolog.
      
 0.533
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.