STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX3XATP-dependent RNA helicase DDX3X isoform X1. (736 aa)    
Predicted Functional Partners:
TBK1
LOW QUALITY PROTEIN: serine/threonine-protein kinase TBK1.
    
 0.927
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.926
PRPF6
Pre-mRNA-processing factor 6.
   
 0.846
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.838
ATP5F1C
ATP synthase subunit gamma, mitochondrial isoform X1.
   
 0.793
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
   
 0.784
CDC5L
Cell division cycle 5-like protein.
    
 0.780
EIF3B
Eukaryotic translation initiation factor 3 subunit B.
   
 0.774
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
 0.772
ATP5PO
F-type H+-transporting ATPase subunit O.
  
 0.756
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.